ENSCING00000002277 (Ciona intestinalis)
Description [+]
- Synonyms:
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Urochordata; Ciona intestinalis
- Short gene description:
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: -C_intestinalis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | IBN_N | 11 | 88 |
PFAM A | Cse1 | 142 | 512 |
PFAM A | CAS_CSE1 | 513 | 924 |
Protein sequence [+]
| Ciona intestinalis | 7719 | length:924
LKADFIFSQIAEKYLENVEGNPGYAVMLLKLVDDGRQQQNPGMVPLAAAITFKNFVKRNW
RVNEDEASKVSEQDRNTIKCTVVDLMLTSPKQYQKQLSEAISIIGREDFPEKWPSLLEDM
NKKFQSADFHIINGVLQTAHSLFKRYRHEFRSDKLWTEIKHVLTTFAAPLTELFVNTVKL
AEQHSADKESLKVLFSSLVLISKVFYSLNYQDLPEFFEDNMETWMKHFHALLTTDNAILH
TQGEEEAGLVELLQSQICDNVALYAQKYDEEFAKFLPQFVTAVWNLLVNTGKEVKYDLLV
SNAIGFLRSVCERQQYKSLFEDEGVLVSICEKVVVPNMEFRTADEEQFEDNPEEYIRRDL
EGSDVDTRRRAACDLVKGLTKFFEAPVTQIFSQYVASMLQQYASNPAVNWKSKDAAIYLV
TSLAQKGSTAKHGTTQANQLVNLDEFFTSHILTDLNQENVNNLPVLKSDSIRFVVTFRNQ
LGKPNLLLVFPHLTRLLTSTSHVVHTYAAHAIERLLMIKDGNVPLRFRKEDVHPHLESLL
SNIFGAMSMAGSEENEYMMKALLRIASLSQETILPYMPTLVEGLTQKLTIVSKNPNKPHF
NHYLFEVLSLCIRTTCANDKSAVKSFEAALFGIFTDILQRDVTEFIPYVFQVMSLLLELH
EPPVPETYMALFPHLLAPVLWERPGNVPPLVRLMQAFIEKGGDGIGRSEKFNNVLGVFQK
LIASKSNDHFGFYLLNSMVEHMQPDLLASYMKQIFSLLFQRLMKSKTSKYVRGLLVFFSL
YIIKNSADSFQQLVDSLQDKMFRMVLEKLIISETQKVSGAMERKICSVGMTKLLTSCTAL
LDENYSQLWAPLLEALIGLFELPLDDTVADDEHFIEIEDTPGYQTAYSQLAFAGKREHDP
VSVENPKFYLAQQLSRLSKHVPGK
RVNEDEASKVSEQDRNTIKCTVVDLMLTSPKQYQKQLSEAISIIGREDFPEKWPSLLEDM
NKKFQSADFHIINGVLQTAHSLFKRYRHEFRSDKLWTEIKHVLTTFAAPLTELFVNTVKL
AEQHSADKESLKVLFSSLVLISKVFYSLNYQDLPEFFEDNMETWMKHFHALLTTDNAILH
TQGEEEAGLVELLQSQICDNVALYAQKYDEEFAKFLPQFVTAVWNLLVNTGKEVKYDLLV
SNAIGFLRSVCERQQYKSLFEDEGVLVSICEKVVVPNMEFRTADEEQFEDNPEEYIRRDL
EGSDVDTRRRAACDLVKGLTKFFEAPVTQIFSQYVASMLQQYASNPAVNWKSKDAAIYLV
TSLAQKGSTAKHGTTQANQLVNLDEFFTSHILTDLNQENVNNLPVLKSDSIRFVVTFRNQ
LGKPNLLLVFPHLTRLLTSTSHVVHTYAAHAIERLLMIKDGNVPLRFRKEDVHPHLESLL
SNIFGAMSMAGSEENEYMMKALLRIASLSQETILPYMPTLVEGLTQKLTIVSKNPNKPHF
NHYLFEVLSLCIRTTCANDKSAVKSFEAALFGIFTDILQRDVTEFIPYVFQVMSLLLELH
EPPVPETYMALFPHLLAPVLWERPGNVPPLVRLMQAFIEKGGDGIGRSEKFNNVLGVFQK
LIASKSNDHFGFYLLNSMVEHMQPDLLASYMKQIFSLLFQRLMKSKTSKYVRGLLVFFSL
YIIKNSADSFQQLVDSLQDKMFRMVLEKLIISETQKVSGAMERKICSVGMTKLLTSCTAL
LDENYSQLWAPLLEALIGLFELPLDDTVADDEHFIEIEDTPGYQTAYSQLAFAGKREHDP
VSVENPKFYLAQQLSRLSKHVPGK
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Information from other databases [+]
- Ensembl genome browser [?] : ENSCING00000002277
- Expression info from Arrayexpress [?] : ENSCING00000002277
- Protein expression from Protein Atlas: [?] ENSCING00000002277
Click on [?] for more information.