TRAF6 (Xenopus tropicalis)
Description [+]
- Synonyms: TRAF6
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Amphibia; Xenopus tropicalis
- Short gene description: Traf6-prov protein. [Source:UniProtKB/TrEMBL;Acc:Q641J5]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TRAF6-X_tropicalis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | zf-C3HC4 | 72 | 110 |
PFAM A | zf-TRAF | 153 | 203 |
PFAM A | zf-TRAF | 206 | 263 |
PFAM A | MATH | 393 | 537 |
Protein sequence [+]
traf6 | Xenopus tropicalis | 8364 | length:558
MSILNCRPSFDGVDTDDACCGAMASACCVNTKEDGESPSAGSPSGTPQSLVLEDVQGYDV
EFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQLF
PDNFAKREILSLRVKCPSQGCTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHM
FEECPRRQIFCENCALAMALEDKLNHDQTCPLAYVTCEYCQTNLIREQMPAHYSMDCTMA
PIPCMYYEFGCTEKMQRNDLARHLQEFTQAHMRMMAQTLRSFSSSVTPTSHMPDISFCDP
SQFEPAPPSVATVHSSHTPSQNDCTQETRNLRETIEQLEGRLVRQDHQIRELIAKMETQC
TYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGK
PGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQ
DQEEVMDTKPELLAFQRPTVARNPKGFGYVTFMHLQALKQRQYVKNDTLLVRCSVTTHLD
LISPRREGFQPRSGDGAL
EFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQLF
PDNFAKREILSLRVKCPSQGCTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHM
FEECPRRQIFCENCALAMALEDKLNHDQTCPLAYVTCEYCQTNLIREQMPAHYSMDCTMA
PIPCMYYEFGCTEKMQRNDLARHLQEFTQAHMRMMAQTLRSFSSSVTPTSHMPDISFCDP
SQFEPAPPSVATVHSSHTPSQNDCTQETRNLRETIEQLEGRLVRQDHQIRELIAKMETQC
TYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGK
PGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQ
DQEEVMDTKPELLAFQRPTVARNPKGFGYVTFMHLQALKQRQYVKNDTLLVRCSVTTHLD
LISPRREGFQPRSGDGAL
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0009615 | response to virus | biological_proccess | IEA |
GO:0009617 | response to bacterium | biological_proccess | IEA |
GO:0045941 | positive regulation of transcription | biological_proccess | IEA |
GO:0016563 | transcription activator activity | mollecular_function | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSXETG00000007549
- Expression info from Arrayexpress [?] : ENSXETG00000007549
- Protein expression from Protein Atlas: [?] ENSXETG00000007549
Click on [?] for more information.