APAF1 (Xenopus tropicalis)
Description [+]
- Synonyms: APAF1
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Amphibia; Xenopus tropicalis
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-X_tropicalis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
| Source | Domain Name | Start | End |
|---|---|---|---|
| PFAM A | CARD | 6 | 90 |
| PFAM A | NB-ARC | 129 | 414 |
| PFAM A | WD40 | 605 | 643 |
| PFAM A | WD40 | 647 | 685 |
| PFAM A | WD40 | 689 | 729 |
| PFAM A | WD40 | 733 | 771 |
| PFAM A | WD40 | 868 | 906 |
| PFAM A | WD40 | 992 | 1030 |
| PFAM A | WD40 | 1074 | 1112 |
| PFAM A | WD40 | 1116 | 1154 |
Protein sequence [+]
APAF1 | Xenopus tropicalis | 8364 | length:1248
MDEKARSLLLQNRTALVRDIRTAYIMDHMISDQVITPEEEAQVKSQRTQMDKANFLINLI
LGKSNQAYVSFYNALLHEGYKDLAVLLKEAANAELSDSTKSSSNGITSYVKTVLCEGAVP
QRPVVFVTRLKLVSKIQQSLYKLSVESGWVTVYGMAGCGKTVLAAEALRDHKILNECFPG
GVHWVSVGRQDKAGLLMKLQNLCTRLDQEAKYSQRPPLNAEEARERLRLMVNRMYPRCLI
VLDDVWDSWVLKAFDIQCRVLITSRDKSVTDSLPGFKEAVHVDSELEHSKGLEILSRFLN
IKAEALPSQAHNIIKVSKGSPLVVSLIGALLREFPTRWDFYLTQLKRKQFKRIRKSSSYD
YEALDEAMSISVDNLKEDFKEYYNDFSIIEKDVKVPTQVLCILWDMEREDVEDMMQEFVN
KSLVYCDRNGKSYSYYLHDLQLDYLTERNRDRLTVLHSKLVDQYKKHYSSKSPAVDQEDS
VYWYHYLAYHMAKANMHQDLCSLLFSLNWLKAKTELFGTAHLIHEFVQYRNILDNQNAKA
REHFQEFIAVNGHLLGSNPDVSIVQLGLGQAEDSEVYKQAILQAKEELQSGALYVNWINK
QSIKNLPTLVVRPHKDAVFHACFSSDGQRIASCGADKTLQVFKSETGEKLLEIEAHDDEV
LCCAFSADEKLLATCSADRKVKIWNAKTGKPLRVYEEHIEQVNCCQFTNSLSAPLLATCS
NDCLIKLWNSEKNYCHNTLIGHIESVYHCRYSPDDRYLASSSMDGSLKIWDVESANEEKS
IEVAKLFENEDEAQPEVLLKCCAWSNDGSRIMVTARNFLCIYDAERCNLLSQLKACHQIL
YCDFCTTNQIAALALSHYVVQLWDIDSSTKIADFNAHLSWVHCVKFSPKSSSFLTSSDDQ
TVKLWETSNVSKPAATNLKREFDVTFSGERTLVLATSKDDCILLINGMTGETLSQIRAQD
NCVTCCCLSTDYQLAAIGHRDGKVKILDLSGGEILHKLDGHRDTVQHCQFTADGKLLVSS
SDDCTVRVWNLVSGKNLELCGHKEPVKFFKILQESKVFSWSFDGTVKVWNLLTGQLIKEF
ICHSATVLACDISPDSTKFSSASTDKSAKIWNLDNCALLHELNKHQSCVRCCRFSWDNQY
LATGDDSGKIMIWSVQNGELLRECCDVSVNNENSLHDGWVTDLHFSPDNKLIVSSGANIK
WWEVDTGACKQTFYTIGTNLKSIHVCSIFRTFVTIDNLGILYVLQLIE
LGKSNQAYVSFYNALLHEGYKDLAVLLKEAANAELSDSTKSSSNGITSYVKTVLCEGAVP
QRPVVFVTRLKLVSKIQQSLYKLSVESGWVTVYGMAGCGKTVLAAEALRDHKILNECFPG
GVHWVSVGRQDKAGLLMKLQNLCTRLDQEAKYSQRPPLNAEEARERLRLMVNRMYPRCLI
VLDDVWDSWVLKAFDIQCRVLITSRDKSVTDSLPGFKEAVHVDSELEHSKGLEILSRFLN
IKAEALPSQAHNIIKVSKGSPLVVSLIGALLREFPTRWDFYLTQLKRKQFKRIRKSSSYD
YEALDEAMSISVDNLKEDFKEYYNDFSIIEKDVKVPTQVLCILWDMEREDVEDMMQEFVN
KSLVYCDRNGKSYSYYLHDLQLDYLTERNRDRLTVLHSKLVDQYKKHYSSKSPAVDQEDS
VYWYHYLAYHMAKANMHQDLCSLLFSLNWLKAKTELFGTAHLIHEFVQYRNILDNQNAKA
REHFQEFIAVNGHLLGSNPDVSIVQLGLGQAEDSEVYKQAILQAKEELQSGALYVNWINK
QSIKNLPTLVVRPHKDAVFHACFSSDGQRIASCGADKTLQVFKSETGEKLLEIEAHDDEV
LCCAFSADEKLLATCSADRKVKIWNAKTGKPLRVYEEHIEQVNCCQFTNSLSAPLLATCS
NDCLIKLWNSEKNYCHNTLIGHIESVYHCRYSPDDRYLASSSMDGSLKIWDVESANEEKS
IEVAKLFENEDEAQPEVLLKCCAWSNDGSRIMVTARNFLCIYDAERCNLLSQLKACHQIL
YCDFCTTNQIAALALSHYVVQLWDIDSSTKIADFNAHLSWVHCVKFSPKSSSFLTSSDDQ
TVKLWETSNVSKPAATNLKREFDVTFSGERTLVLATSKDDCILLINGMTGETLSQIRAQD
NCVTCCCLSTDYQLAAIGHRDGKVKILDLSGGEILHKLDGHRDTVQHCQFTADGKLLVSS
SDDCTVRVWNLVSGKNLELCGHKEPVKFFKILQESKVFSWSFDGTVKVWNLLTGQLIKEF
ICHSATVLACDISPDSTKFSSASTDKSAKIWNLDNCALLHELNKHQSCVRCCRFSWDNQY
LATGDDSGKIMIWSVQNGELLRECCDVSVNNENSLHDGWVTDLHFSPDNKLIVSSGANIK
WWEVDTGACKQTFYTIGTNLKSIHVCSIFRTFVTIDNLGILYVLQLIE
Structure links:
Evolution [+]
Explore tree at phylomeDB: Click here.
DeathBase uses Jalview, an external application that requires Java. Please, check that you have the latest version of Java
installed and that Java is enabled in your browser. When correctly installed your browser should display the following examples properly. You can download the latest version of Java at Java Download Site.
Information from other databases [+]
- Ensembl genome browser [?] : ENSXETG00000006695
- Expression info from Arrayexpress [?] : ENSXETG00000006695
- Protein expression from Protein Atlas: [?] ENSXETG00000006695
Click on [?] for more information.
