APAF1 (Taeniopygia guttata)
Description [+]
- Synonyms: APAF1
- Species: Taeniopygia guttata
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-T_guttata
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 7 | 91 |
PFAM A | NB-ARC | 130 | 415 |
PFAM A | WD40 | 646 | 684 |
PFAM A | WD40 | 688 | 728 |
PFAM A | WD40 | 732 | 770 |
PFAM A | WD40 | 871 | 909 |
PFAM A | WD40 | 1077 | 1115 |
PFAM A | WD40 | 1119 | 1157 |
Protein sequence [+]
APAF1 | Taeniopygia guttata | 59729 | length:1248
NMDVKSRNYLLMNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTQKERAAMLINI
ILTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGV
PQRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFP
GGVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSL
LVLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFV
NMKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSY
DYEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFV
NKSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQED
CMYWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDST
VRENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKK
SLKNLYRLVVRPHRDAVYHACFSKDKQRIASCGADKTLQVFKAESGERLLEINAHDDEIL
CCTFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSN
DTFIKIWDLNKKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWESRSGNELKSI
EIKDFFKNADEQPDDVEVLVKCCSWSRNGDKILVVAKNKLLLFDINTCGLLTQVIVSHHS
TIQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSS
DDQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTA
AQESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWEAYRTSVQHCRFTPDCQTL
ISSAHDPVIQVWNWQLSECVFLRGHNEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPE
RDFACHRDAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPN
NKLLATGDDKGEIRIWDVLTGTLLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGG
YLKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQ
ILTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGV
PQRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFP
GGVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSL
LVLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFV
NMKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSY
DYEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFV
NKSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQED
CMYWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDST
VRENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKK
SLKNLYRLVVRPHRDAVYHACFSKDKQRIASCGADKTLQVFKAESGERLLEINAHDDEIL
CCTFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSN
DTFIKIWDLNKKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWESRSGNELKSI
EIKDFFKNADEQPDDVEVLVKCCSWSRNGDKILVVAKNKLLLFDINTCGLLTQVIVSHHS
TIQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSS
DDQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTA
AQESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWEAYRTSVQHCRFTPDCQTL
ISSAHDPVIQVWNWQLSECVFLRGHNEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPE
RDFACHRDAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPN
NKLLATGDDKGEIRIWDVLTGTLLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGG
YLKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQ
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
DeathBase uses Jalview, an external application that requires Java. Please, check that you have the latest version of Java
installed and that Java is enabled in your browser. When correctly installed your browser should display the following examples properly. You can download the latest version of Java at Java Download Site.
Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0006915 | apoptosis | biological_proccess | IEA |
GO:0008635 | activation of caspase activity by cytochrome c | biological_proccess | IEA |
GO:0007275 | multicellular organismal development | biological_proccess | IEA |
GO:0007420 | brain development | biological_proccess | IEA |
GO:0006309 | DNA fragmentation during apoptosis | biological_proccess | IEA |
GO:0006919 | activation of caspase activity | biological_proccess | IEA |
GO:0001843 | neural tube closure | biological_proccess | IEA |
GO:0030900 | forebrain development | biological_proccess | IEA |
GO:0051402 | neuron apoptosis | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0042802 | identical protein binding | mollecular_function | IEA |
GO:0016505 | apoptotic protease activator activity | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005625 | soluble fraction | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTGUG00000008761
- Expression info from Arrayexpress [?] : ENSTGUG00000008761
- Protein expression from Protein Atlas: [?] ENSTGUG00000008761
Click on [?] for more information.