MEFV (Rattus norvegicus)
Description [+]
- Synonyms: MEFV
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Rodentia; Rattus norvegicus
- Short gene description: Pyrin (Marenostrin). [Source:UniProtKB/Swiss-Prot;Acc:Q9JJ25]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: MEFV-R_norvegicus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | PAAD_DAPIN | 5 | 88 |
PFAM A | zf-B_box | 469 | 511 |
Protein sequence [+]
Mefv | Rattus norvegicus | 10116 | length:804
MANTRVDHLLNTLEELLPYELEKFKFKLHTTSLEKGHSRIPLSLVKMARPIKLTRLLLTY
YGEEYAVRLTLQILRATNQRQLAEELHKATGPEHLTEENGVGGSVQSSAENKDKGVKGSD
VPGEDEAQQNDDESDILPPIQAEVGKGPQKKSLAKRKDQRGPESLDSQTKPGARSAAPLY
RRTLVTQSPGDKENRAGAQLRRNASSAGRLQGLYSNVPGRREIKKAEVYLPSGKKRPRSL
EITTYSKEGEPPNSEALPTQEETRNGSLIRTRTATLNGRTTGTLEKGVGIPEHSMMLDEE
TSRNMSSKISLTREKRCTASWTENGNGGPETPETLGETVSSILCDSCSPKVLLSLGEKLA
QTPEDPASLGQAASKGILPQRSRKRDAGPEKCTFTHLAQQVASNFGRSRDKVACPLCHTQ
GELPAKACVQSSCSCSVAPGDPKASGRHSICFQCQSSRAGKSCEAQSPQFLPQCPRHMKQ
VQLLFCEDHREPICLICRLSQEHQGHRVRPIEEAALQYKEQIRKQLERLREMRGYVEEHK
LPADKKAEDFLKQTETQKQRISCPLEKLFQFLEQQEQLFVTWLQELVQTIGKVRETYYTQ
VSLLDKLIGELEAKQDQPEWELMQDIGATLHRAETMTASELLGIPPGVKEKLHLLYQKSK
SAEKNMQRFSEMLGSEMAFSASDVATREGCRPSTTKAQALIPTVHLKCDGAHTQDFDVIL
CAELEAGGSEPQDYLHPSSAQDTPELHEIHSQNNKRKFKSFLKWKPSFIGSALGEAHTSI
PARSSSSCSCRDWDLAAVHPSLIF
YGEEYAVRLTLQILRATNQRQLAEELHKATGPEHLTEENGVGGSVQSSAENKDKGVKGSD
VPGEDEAQQNDDESDILPPIQAEVGKGPQKKSLAKRKDQRGPESLDSQTKPGARSAAPLY
RRTLVTQSPGDKENRAGAQLRRNASSAGRLQGLYSNVPGRREIKKAEVYLPSGKKRPRSL
EITTYSKEGEPPNSEALPTQEETRNGSLIRTRTATLNGRTTGTLEKGVGIPEHSMMLDEE
TSRNMSSKISLTREKRCTASWTENGNGGPETPETLGETVSSILCDSCSPKVLLSLGEKLA
QTPEDPASLGQAASKGILPQRSRKRDAGPEKCTFTHLAQQVASNFGRSRDKVACPLCHTQ
GELPAKACVQSSCSCSVAPGDPKASGRHSICFQCQSSRAGKSCEAQSPQFLPQCPRHMKQ
VQLLFCEDHREPICLICRLSQEHQGHRVRPIEEAALQYKEQIRKQLERLREMRGYVEEHK
LPADKKAEDFLKQTETQKQRISCPLEKLFQFLEQQEQLFVTWLQELVQTIGKVRETYYTQ
VSLLDKLIGELEAKQDQPEWELMQDIGATLHRAETMTASELLGIPPGVKEKLHLLYQKSK
SAEKNMQRFSEMLGSEMAFSASDVATREGCRPSTTKAQALIPTVHLKCDGAHTQDFDVIL
CAELEAGGSEPQDYLHPSSAQDTPELHEIHSQNNKRKFKSFLKWKPSFIGSALGEAHTSI
PARSSSSCSCRDWDLAAVHPSLIF
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
DeathBase uses Jalview, an external application that requires Java. Please, check that you have the latest version of Java
installed and that Java is enabled in your browser. When correctly installed your browser should display the following examples properly. You can download the latest version of Java at Java Download Site.
Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006954 | inflammatory response | biological_proccess | ISS |
GO:0006954 | inflammatory response | biological_proccess | IEA |
GO:0003779 | actin binding | mollecular_function | ISS |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0008270 | zinc ion binding | mollecular_function | NAS |
GO:0046872 | metal ion binding | mollecular_function | IEA |
GO:0003779 | actin binding | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
GO:0005737 | cytoplasm | cell_component | IEA |
GO:0005856 | cytoskeleton | cell_component | IEA |
GO:0005874 | microtubule | cell_component | IEA |
GO:0005875 | microtubule associated complex | cell_component | ISS |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005875 | microtubule associated complex | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSRNOG00000008134
- Expression info from Arrayexpress [?] : ENSRNOG00000008134
- Protein expression from Protein Atlas: [?] ENSRNOG00000008134
Click on [?] for more information.