NP_001101175.1 (Rattus norvegicus)
Description [+]
- Synonyms: NP_001101175.1
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Rodentia; Rattus norvegicus
- Short gene description: WD repeat domain 3 [Source:RefSeq_peptide;Acc:NP_001101175]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: NP_001101175.1-R_norvegicus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | WD40 | 55 | 93 |
PFAM A | WD40 | 97 | 135 |
PFAM A | WD40 | 485 | 523 |
PFAM A | WD40 | 580 | 618 |
PFAM A | WD40 | 622 | 660 |
PFAM A | WD40 | 664 | 702 |
PFAM A | Utp12 | 720 | 938 |
Protein sequence [+]
NP_001101175.1 | Rattus norvegicus | 10116 | length:942
MGLTKQYLRYVASAVFGLIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILI
LQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGG
RLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDN
QHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQEIDDPEEPEPKKIKEC
PGIQDTPEAEDRTLEADDEKSEDRILSCRKAGSLMREGRDRVVNLAVDKTGRILACHGTD
SVLEVFCILSKAEVQKKMDKKLKKARKKARLNSANEEEDPETSVSMTLQDEILRVTKIKT
SAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLSTSLPNPQPVRTSRITIGGHRSDVRTL
SFSSDNIAVLSAAAESVKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLY
DLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVK
QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH
DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD
ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLILEEERELQREA
EYEESVAKEEQPAVPGETQGDNYFTGKKTIETVKAAERIMEAIELYREETAKMKEHRAIC
RAAGKEVPLPVNPILMAHGNISPSAYVLETFKGIRSSELEEALLVLPFSYVPDILTLFNG
FIQTGSDVELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVRQVQDVIGFNMAG
LNYLKRECEAKSEVMFFAEATSHLEEKKRKRKNRRKMILTLT
LQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGG
RLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDN
QHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQEIDDPEEPEPKKIKEC
PGIQDTPEAEDRTLEADDEKSEDRILSCRKAGSLMREGRDRVVNLAVDKTGRILACHGTD
SVLEVFCILSKAEVQKKMDKKLKKARKKARLNSANEEEDPETSVSMTLQDEILRVTKIKT
SAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLSTSLPNPQPVRTSRITIGGHRSDVRTL
SFSSDNIAVLSAAAESVKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLY
DLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVK
QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH
DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD
ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLILEEERELQREA
EYEESVAKEEQPAVPGETQGDNYFTGKKTIETVKAAERIMEAIELYREETAKMKEHRAIC
RAAGKEVPLPVNPILMAHGNISPSAYVLETFKGIRSSELEEALLVLPFSYVPDILTLFNG
FIQTGSDVELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVRQVQDVIGFNMAG
LNYLKRECEAKSEVMFFAEATSHLEEKKRKRKNRRKMILTLT
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0007165 | signal transduction | biological_proccess | IEA |
GO:0006364 | rRNA processing | biological_proccess | IEA |
GO:0008601 | protein phosphatase type 2A regulator activity | mollecular_function | IEA |
GO:0000159 | protein phosphatase type 2A complex | cell_component | IEA |
GO:0032040 | small-subunit processome | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSRNOG00000019670
- Expression info from Arrayexpress [?] : ENSRNOG00000019670
- Protein expression from Protein Atlas: [?] ENSRNOG00000019670
- entrezgene: 310720
- refseq_dna: NM_001107705
- refseq_peptide: NP_001101175
Click on [?] for more information.