APAF1 (Oryzias latipes)
Description [+]
- Synonyms: APAF1
- Species: Oryzias latipes
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-O_latipes
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 6 | 90 |
PFAM A | NB-ARC | 131 | 415 |
PFAM A | WD40 | 650 | 687 |
PFAM A | WD40 | 738 | 776 |
PFAM A | WD40 | 874 | 912 |
PFAM A | WD40 | 995 | 1033 |
PFAM A | WD40 | 1037 | 1077 |
PFAM A | WD40 | 1081 | 1119 |
PFAM A | WD40 | 1123 | 1161 |
Protein sequence [+]
APAF1 | Oryzias latipes | 8090 | length:1207
LDERARACLLKSRHKLEEIMKPAYLMDHMISDEAITVEEEDMIANQNTKREQAAALVDLL
LKKDNYSFRSFYNALLKEEYDELANLLKEDLPLTQFTSSSQCPGEKCLGAVVQTVLSEGG
VPPRPEAFVHRPKEENEIREKLYKLQKQPGWVTVFGMAGSGKSVLASEAVRHKELIEECF
PEGIHWVSIGRLDKPDLLAKIQTLCFRLEQNLDSQQFHRPPSTLDEAKERLRFLMIRKYT
RTLLILDDVWDSTVLKAVDIHCRILLTTRNRSLADVVNGSKHEVEVNSGLDEDKALEILS
QLSKIEMYRLPEEALSIVKKCQGSPLAVSMIGSLLRENPDRWGYYLRQLEKKQFRRIRKS
SSYNYEALDQAIAAGIEDLSDDYRDLYNLLTVLHKDVKVTAKMMSVLWGQDQVDTEDTLS
EFVNRAMLFVDSQSQPNVFYLHDLQLDFLLEQNKNQLKVLHKKMVERYQHRYKDRPLTSR
DEESLYWIRYLAYHMANANLFQELHSLLFSLDWISVKGQIMGPAHLINDYLEYGSILDKE
NNEMCSEFQEFLSLSGHYLEQRPFPDIVQLALSQPHTSEVYRQARLLAQERAKDGKLYFD
LINETSVDSLSRLVIHPHQGSLYACFSNDGTKIASCGATKNLKVFKSTSGEKLSEFELRD
EVVCCAFSPDDSLLAVCSSGRTIQVWNVHQVKLLRTFQEEHKEQINHCVFTNTTRRLLLA
TCSNDQMGNAKLWNLNKPTCQNTIFGHFEPVNHCCFSPDDNYVSTSSNDGTVKLFEATSG
NIWKSIDVRGMFKDPDNDDEVAVRCSSWTADGKRILCAARNAALMFDVETSDLLLEIRPS
FLSTVLHCDVCPTSNLLAMALSNYAVELWDIEENAKKADCSGHLSWVERVQFSRDGSQML
SCSDDETIRLWETKKLHMTSAVFLKRNTDVLFNDDNIFVSAPDHCNRLQVRTGDTLLQSE
KKPSRIRCTCLLRDLSVVALGQEDGTVQVLAVPSAKPLATLLGHTKTVLHCQFTHYGQTL
ITSSEDCTIRVWNLPSGECKVLQGHKEQVRCFALLSPSSNDSRLLSWSFDGTVKVWNTES
GQKLQDIDAHGGAILSCHVSPDGRLFATSSADRTAKLWHCEAWQCTFTLTGHQECVRSCR
FSWDSECLATGDDNGEIRLWNVNDGSLLRICSREVKDSMDSFHGGWVTDLHFSPDNSLLV
SAGGYIK
LKKDNYSFRSFYNALLKEEYDELANLLKEDLPLTQFTSSSQCPGEKCLGAVVQTVLSEGG
VPPRPEAFVHRPKEENEIREKLYKLQKQPGWVTVFGMAGSGKSVLASEAVRHKELIEECF
PEGIHWVSIGRLDKPDLLAKIQTLCFRLEQNLDSQQFHRPPSTLDEAKERLRFLMIRKYT
RTLLILDDVWDSTVLKAVDIHCRILLTTRNRSLADVVNGSKHEVEVNSGLDEDKALEILS
QLSKIEMYRLPEEALSIVKKCQGSPLAVSMIGSLLRENPDRWGYYLRQLEKKQFRRIRKS
SSYNYEALDQAIAAGIEDLSDDYRDLYNLLTVLHKDVKVTAKMMSVLWGQDQVDTEDTLS
EFVNRAMLFVDSQSQPNVFYLHDLQLDFLLEQNKNQLKVLHKKMVERYQHRYKDRPLTSR
DEESLYWIRYLAYHMANANLFQELHSLLFSLDWISVKGQIMGPAHLINDYLEYGSILDKE
NNEMCSEFQEFLSLSGHYLEQRPFPDIVQLALSQPHTSEVYRQARLLAQERAKDGKLYFD
LINETSVDSLSRLVIHPHQGSLYACFSNDGTKIASCGATKNLKVFKSTSGEKLSEFELRD
EVVCCAFSPDDSLLAVCSSGRTIQVWNVHQVKLLRTFQEEHKEQINHCVFTNTTRRLLLA
TCSNDQMGNAKLWNLNKPTCQNTIFGHFEPVNHCCFSPDDNYVSTSSNDGTVKLFEATSG
NIWKSIDVRGMFKDPDNDDEVAVRCSSWTADGKRILCAARNAALMFDVETSDLLLEIRPS
FLSTVLHCDVCPTSNLLAMALSNYAVELWDIEENAKKADCSGHLSWVERVQFSRDGSQML
SCSDDETIRLWETKKLHMTSAVFLKRNTDVLFNDDNIFVSAPDHCNRLQVRTGDTLLQSE
KKPSRIRCTCLLRDLSVVALGQEDGTVQVLAVPSAKPLATLLGHTKTVLHCQFTHYGQTL
ITSSEDCTIRVWNLPSGECKVLQGHKEQVRCFALLSPSSNDSRLLSWSFDGTVKVWNTES
GQKLQDIDAHGGAILSCHVSPDGRLFATSSADRTAKLWHCEAWQCTFTLTGHQECVRSCR
FSWDSECLATGDDNGEIRLWNVNDGSLLRICSREVKDSMDSFHGGWVTDLHFSPDNSLLV
SAGGYIK
Evolution [+]
Explore tree at phylomeDB:   Click here.
DeathBase uses Jalview, an external application that requires Java. Please, check that you have the latest version of Java
installed and that Java is enabled in your browser. When correctly installed your browser should display the following examples properly. You can download the latest version of Java at Java Download Site.
Information from other databases [+]
- Ensembl genome browser [?] : ENSORLG00000015449
- Expression info from Arrayexpress [?] : ENSORLG00000015449
- Protein expression from Protein Atlas: [?] ENSORLG00000015449
Click on [?] for more information.