APAF1 (Gallus gallus)
Description [+]
- Synonyms: APAF1
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Aves; Gallus gallus
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-G_gallus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 6 | 90 |
PFAM A | NB-ARC | 129 | 415 |
PFAM A | WD40 | 646 | 684 |
PFAM A | WD40 | 736 | 774 |
PFAM A | WD40 | 875 | 913 |
PFAM A | WD40 | 1081 | 1119 |
PFAM A | WD40 | 1123 | 1161 |
Protein sequence [+]
APAF1 | Gallus gallus | 9031 | length:1254
MDENSRMCLITNRQALEKDIKTSYIMDHMVADQVLTLQEEEKVKQQNTQKERAAMLINTL
LTKDNNAYRSFYNALLHEGYRDLAALLQDGIPAFSSKNGKNAMDERTSYVKTALCEGGVP
QRPVVFVSRPKLVDDIKQKLRSLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLRGCFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLPQRPPLNIEEAKDRLRLLMLRKYQSRSL
LVLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVSGNKYEIHVESGLTHEKGLEVLALFV
NMKISELPEQASCIVTECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSY
DYEALDEAMSISVEQLSNDLKEYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFV
NKSLLFCDRNGNSFHYYLHDLQLDFLTEKNCNQLQELHKNIVNQYKRYYKLHVPVLSQED
CMYWYNFLAYHMAGANMQKELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDEKDSI
IRENFQEFLSLNGHLLGRQPFPDITQLGLCQPETSEVYQQAKLRAQRETGTFYLEWINKK
SLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEIL
CCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSD
DTYIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANE
LRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVII
SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLF
LTSSEDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSII
MQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTD
CQTLISSAHDAVIQVWNWQLNECVFLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITT
GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSA
FSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV
SSGGYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVTVDNLGILYVLRKL
LTKDNNAYRSFYNALLHEGYRDLAALLQDGIPAFSSKNGKNAMDERTSYVKTALCEGGVP
QRPVVFVSRPKLVDDIKQKLRSLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLRGCFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLPQRPPLNIEEAKDRLRLLMLRKYQSRSL
LVLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVSGNKYEIHVESGLTHEKGLEVLALFV
NMKISELPEQASCIVTECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSY
DYEALDEAMSISVEQLSNDLKEYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFV
NKSLLFCDRNGNSFHYYLHDLQLDFLTEKNCNQLQELHKNIVNQYKRYYKLHVPVLSQED
CMYWYNFLAYHMAGANMQKELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDEKDSI
IRENFQEFLSLNGHLLGRQPFPDITQLGLCQPETSEVYQQAKLRAQRETGTFYLEWINKK
SLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEIL
CCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSD
DTYIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANE
LRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVII
SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLF
LTSSEDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSII
MQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTD
CQTLISSAHDAVIQVWNWQLNECVFLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITT
GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSA
FSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV
SSGGYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVTVDNLGILYVLRKL
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006952 | defense response | biological_proccess | IEA |
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0006915 | apoptosis | biological_proccess | IEA |
GO:0008635 | activation of caspase activity by cytochrome c | biological_proccess | IEA |
GO:0007275 | multicellular organismal development | biological_proccess | IEA |
GO:0007420 | brain development | biological_proccess | IEA |
GO:0006309 | DNA fragmentation during apoptosis | biological_proccess | IEA |
GO:0006919 | activation of caspase activity | biological_proccess | IEA |
GO:0001843 | neural tube closure | biological_proccess | IEA |
GO:0030900 | forebrain development | biological_proccess | IEA |
GO:0051402 | neuron apoptosis | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0042802 | identical protein binding | mollecular_function | IEA |
GO:0016505 | apoptotic protease activator activity | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005625 | soluble fraction | cell_component | IEA |
Check GO Evidence Codes here
KEGG Pathways [+]
Information from other databases [+]
- Ensembl genome browser [?] : ENSGALG00000011531
- Expression info from Arrayexpress [?] : ENSGALG00000011531
- Protein expression from Protein Atlas: [?] ENSGALG00000011531
- entrezgene: 417926
Click on [?] for more information.