APAF1 (Gasterosteus aculeatus)
Description [+]
- Synonyms: APAF1
- Species: Gasterosteus aculeatus
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-G_aculeatus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 6 | 90 |
PFAM A | NB-ARC | 129 | 416 |
PFAM A | WD40 | 649 | 687 |
PFAM A | WD40 | 739 | 777 |
PFAM A | WD40 | 873 | 911 |
PFAM A | WD40 | 998 | 1034 |
PFAM A | WD40 | 1123 | 1161 |
Protein sequence [+]
APAF1 | Gasterosteus aculeatus | 69293 | length:1262
LEEGARSCLMRFRHRLEDDIKPPYLMDHMVTDGVLTGDEEERIKNQPSRKDQAAALLALL
LMKDNRAYISFYNAMVQEGYNDLANLLHRDLPLGLPEGLKRSTDCCTPYVQTVLSEGGVP
QRPVVFVSRPELVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAARHHGLIEDCFPG
GIHWLSIGQLDKPDLLVKIQSLCFRLEQSLDSHPLHRPPNSLDEAKERLRFLMLRRHPRS
LLILDDIWDSTVLKAFDLHCRILFTTRNRSLADSVSGSRYEVEVESGLDENKGLEILALY
TKTKLKGLPEEARSIVRECKGSPLVVSLIGALLREKPNRWRYYLGQLQQKQFKRIRKSSS
YDYDALDQAMAASIEVLPDEHREFYKDLTVLEKDTKVPAKVLAVLWDLETEEVEDILEEF
VNKSLLFVDSHNKPFLYYLHDLQLDFLVEQNRTQLESLHSKVVHQYQQHYKDAHSTSGDE
ECLYWIRFLTYHMAKANLFQELYSLMFSLDWVSTKAQLMGPAYLINDYVEYGPILDKENS
ETRSQFQEFLSLNGHHLEQRPFPDVVQLALSQPRTSEVYKQALLQARDRATTGKLYFEWL
NKGSVESLSRLVIHPHQGSIYSACFSQDGAKIASSGASKMLKVFKSTSGEKLMEIQAHDD
EVLCCAFSPDDRLLATCSSDRKVKVWNVERAMLLRVFEEEHEEQVNHCQFTNSTTPRLLL
ATCSNDKVLNTKLWNLNKPSSQNTIFGHFEPVNHCCFSPSDTYLSTSSNDGTVKLFHTSS
ANEWKTINVRDAFAESDEEVLVKCSTWTADGKRIICAARNAALVFDVETSDMLLEIRTNR
LSTVQYCHACPTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVQRVQFSRDGSQLLS
CSDDQTVRLWETNKVHTTSAVCLKRDSDVLFNDEEIIVSAADNCNRLQQVRDGRTGSVLF
QSEEKPSRIRCTSMCRQPSAVALGQEDGTVQVLQVPSGNLLATLLGHTKTVLHCRFSQSG
KTLLTSSEDTTIRKNWFLRPFQKGKAVLSFSPFLSFEINNPTTGGGAFCWLGGGVSSRMR
AWGFHEGRLRQIRVGGGGGGGKERMERNRKTNEGPKLWHCETWKCVHTLSGHRDCVRSCR
FSWDGRRLATGDDNGEIRLWSVMEGTLLRICSRDGKDCMDSLHGGWVTDLHFSPDNGLLV
STGGYIKWWDVETGEALQTFFTTGTALKRIHVSSDFSTFVTIDSIGILYVLQRVVIDRGY
GA
LMKDNRAYISFYNAMVQEGYNDLANLLHRDLPLGLPEGLKRSTDCCTPYVQTVLSEGGVP
QRPVVFVSRPELVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAARHHGLIEDCFPG
GIHWLSIGQLDKPDLLVKIQSLCFRLEQSLDSHPLHRPPNSLDEAKERLRFLMLRRHPRS
LLILDDIWDSTVLKAFDLHCRILFTTRNRSLADSVSGSRYEVEVESGLDENKGLEILALY
TKTKLKGLPEEARSIVRECKGSPLVVSLIGALLREKPNRWRYYLGQLQQKQFKRIRKSSS
YDYDALDQAMAASIEVLPDEHREFYKDLTVLEKDTKVPAKVLAVLWDLETEEVEDILEEF
VNKSLLFVDSHNKPFLYYLHDLQLDFLVEQNRTQLESLHSKVVHQYQQHYKDAHSTSGDE
ECLYWIRFLTYHMAKANLFQELYSLMFSLDWVSTKAQLMGPAYLINDYVEYGPILDKENS
ETRSQFQEFLSLNGHHLEQRPFPDVVQLALSQPRTSEVYKQALLQARDRATTGKLYFEWL
NKGSVESLSRLVIHPHQGSIYSACFSQDGAKIASSGASKMLKVFKSTSGEKLMEIQAHDD
EVLCCAFSPDDRLLATCSSDRKVKVWNVERAMLLRVFEEEHEEQVNHCQFTNSTTPRLLL
ATCSNDKVLNTKLWNLNKPSSQNTIFGHFEPVNHCCFSPSDTYLSTSSNDGTVKLFHTSS
ANEWKTINVRDAFAESDEEVLVKCSTWTADGKRIICAARNAALVFDVETSDMLLEIRTNR
LSTVQYCHACPTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVQRVQFSRDGSQLLS
CSDDQTVRLWETNKVHTTSAVCLKRDSDVLFNDEEIIVSAADNCNRLQQVRDGRTGSVLF
QSEEKPSRIRCTSMCRQPSAVALGQEDGTVQVLQVPSGNLLATLLGHTKTVLHCRFSQSG
KTLLTSSEDTTIRKNWFLRPFQKGKAVLSFSPFLSFEINNPTTGGGAFCWLGGGVSSRMR
AWGFHEGRLRQIRVGGGGGGGKERMERNRKTNEGPKLWHCETWKCVHTLSGHRDCVRSCR
FSWDGRRLATGDDNGEIRLWSVMEGTLLRICSRDGKDCMDSLHGGWVTDLHFSPDNGLLV
STGGYIKWWDVETGEALQTFFTTGTALKRIHVSSDFSTFVTIDSIGILYVLQRVVIDRGY
GA
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Information from other databases [+]
- Ensembl genome browser [?] : ENSGACG00000019839
- Expression info from Arrayexpress [?] : ENSGACG00000019839
- Protein expression from Protein Atlas: [?] ENSGACG00000019839
Click on [?] for more information.