ZGC:158391 (Danio rerio)
Description [+]
- Synonyms: ZGC:158391
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Danio rerio
- Short gene description: hypothetical protein LOC563746 [Source:RefSeq_peptide;Acc:NP_001073654]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: ZGC:158391-D_rerio
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | WD40 | 355 | 393 |
PFAM A | WD40 | 398 | 434 |
PFAM A | WD40 | 558 | 598 |
PFAM A | WD40 | 602 | 638 |
Protein sequence [+]
zgc:158391 | Danio rerio | 7955 | length:639
MDAGFGSTFPAVPQVAKAETNYKQHRRTPSTSSTLTYSTRDDDDGMPPISTPRRSDSAIS
VRSLHSESNMSLRSTFSLHEEEEDTEPQVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFC
RRCALTSEKCPVDNSKLTVVVNNIAVAEQIGELFIHCKYGCRPAASGKSGAYEVDPLGCP
FTIKLSTRKDHEVSCDYRPVRCPNNPNCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIGN
QDTYETHLEVCKFEGLKEFLQQTDDRFHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLEK
NLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGT
FVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNK
LYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK
LKKELTGLNHWVRALVASQNHLYSGSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHH
IVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMD
NMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKFWSC
VRSLHSESNMSLRSTFSLHEEEEDTEPQVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFC
RRCALTSEKCPVDNSKLTVVVNNIAVAEQIGELFIHCKYGCRPAASGKSGAYEVDPLGCP
FTIKLSTRKDHEVSCDYRPVRCPNNPNCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIGN
QDTYETHLEVCKFEGLKEFLQQTDDRFHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLEK
NLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGT
FVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNK
LYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK
LKKELTGLNHWVRALVASQNHLYSGSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHH
IVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMD
NMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKFWSC
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0016567 | protein ubiquitination | biological_proccess | IEA |
GO:0008270 | zinc ion binding | mollecular_function | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0046872 | metal ion binding | mollecular_function | IEA |
GO:0004842 | ubiquitin-protein ligase activity | mollecular_function | IEA |
GO:0005575 | cellular_component | cell_component | ND |
GO:0000151 | ubiquitin ligase complex | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Gene info from ZFIN [?] ZDB-GENE-070112-2212
- Ensembl genome browser [?] : ENSDARG00000060207
- Expression info from Arrayexpress [?] : ENSDARG00000060207
- Protein expression from Protein Atlas: [?] ENSDARG00000060207
- Community gene edition from Wikigenes: [?] 563746
- entrezgene: 563746
- refseq_dna: NM_001080185
- refseq_peptide: NP_001073654
Click on [?] for more information.