TNC (Danio rerio)
Description [+]
- Synonyms: TNC
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Danio rerio
- Short gene description: tenascin C [Source:RefSeq peptide;Acc:NP_570982]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TNC-D_rerio
Structure & Sequence [+]
Protein sequence [+]
tnc | Danio rerio | 7955 | length:1683
MGMRGLLLASMAVAVLVHLSSAGLVKRVIRHRRESLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDMDSPGTTEIKPKSEQSDQHIEHTTDGENQIVFTHRINIPKQACGCDNHM
PDMKELLNRLEMLEAEVSSLREQCTSGAGCCSAQVTGEVTTKPYCSGRGNYSTDTCSCVC
EPGWKGVNCSEPECPNYCQDQGRCEDGKCVCFEGFGGEDCGIELCPVDCGENGECIDGAC
ICAEGFIGEDCSLSNCPSNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCFDRGRCENG
TCYCDEGFTGEDCGELTCPQNCNHHGRCVNGQCICNIGYSGEDCSKLTCLNDCSERGHCF
NGKCICDPGFEGEDCSLLSCPDNCNGRGHCVNGECICGPGYEGDDCSELSCLNNCHDRGR
CVNGKCICKAGFAGEDCSIKTCPHDCHGRGECVDGKCVCHDGFAGEHCGIKTCPHHCHGH
GQCVDGKCICHKGFAGEDCSIKTCPNHCHGQGQCIDGKCICHDGFAGEDCSIKTCPNHCH
GRGRCCHAGFTGHDCSELTCPNDCHNRGRCVNGQCVCNIGFTGEDCGTKTCPNNCLDRGF
CEDGKCVCFEGYTGEDCSVLTCPADCNDQGQCLNGMCICDLGFTGDDCSEISPPRDLTVT
EVDPETVDVAWVNEMLVTEYLITYVPTAPGGLEMEMRVSGEKKTATIRELEPGIEYLISV
FAVLNSKMSVPVSARIATHLPEPEGLKFKSVKETSVEVEWDPLNIPFDGWNLIFRNTKEE
DGEILNSLAPPETTFEQSGLGPGQEYEVKLEVVKNNTRGPPASKNVVTMIDAPSQVDVRD
VTDTTALVTWLQPVAQVDGISVSYGPNTDSSDRNTIELSSIETQYHLAELSPDTEYEVSL
MARRGEMSSFPIYETFTTDLDSPKHLKAIEQTDESITLEWRNSRANVLNYRVKYGPLSGG
EHGELVFPSGLQDTTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAVTDLDPPKDLQV
SETTETTLALVWRRPVAKIDTYSLVFIPADGDKTELKIPGAANTYILTGLNPGMLHTITL
TAERGRKMSAPATLSASTDEEKPQVGNITISDVSWDSFSMSWDLDRGEVEGFLIEVSDPD
GLSDGQNHTLSGQEFSLAVTDLSPSTFYRVTLYGLYKGELLDPVFAEAITGLGTPKGIRF
SDVTDTSATVHWTMPHTRVDNYRVIYVPIQGGSPLTLRVDGGESQAMLSNLTPGVTYQVT
VIAVKGLEESEPGSERVTTALDKPRGLTAVNISDTEALLLWQPSIATVDGYVITYSADSV
APVMERVSGNTVEFEMSSLTPATLYTVKVYAFRDTAKSAATSTDFTTDVDAPQNLAASNI
QTETAMLTWKPPRADISGYILSFESADGVVKEVVLSPTATFYSMSQLTASTEYTVKLQAI
AGPKRSRVISTVFLTIGVLYKHPKDCSQALLNGDTTSGLYTIYLRGDESQPLQVYCDMTT
DGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSFGQYELRVDLRD
KGESAYAQYDKFSISEPRARYKVHVGGYSGTAGDSMTYHHGRPFSTYDNDNDIAVTNCAL
SYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWFHWKGHEHSVEFAEMKIRPANFRNFEGRK
KRS
NVPSGSLCSVDMDSPGTTEIKPKSEQSDQHIEHTTDGENQIVFTHRINIPKQACGCDNHM
PDMKELLNRLEMLEAEVSSLREQCTSGAGCCSAQVTGEVTTKPYCSGRGNYSTDTCSCVC
EPGWKGVNCSEPECPNYCQDQGRCEDGKCVCFEGFGGEDCGIELCPVDCGENGECIDGAC
ICAEGFIGEDCSLSNCPSNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCFDRGRCENG
TCYCDEGFTGEDCGELTCPQNCNHHGRCVNGQCICNIGYSGEDCSKLTCLNDCSERGHCF
NGKCICDPGFEGEDCSLLSCPDNCNGRGHCVNGECICGPGYEGDDCSELSCLNNCHDRGR
CVNGKCICKAGFAGEDCSIKTCPHDCHGRGECVDGKCVCHDGFAGEHCGIKTCPHHCHGH
GQCVDGKCICHKGFAGEDCSIKTCPNHCHGQGQCIDGKCICHDGFAGEDCSIKTCPNHCH
GRGRCCHAGFTGHDCSELTCPNDCHNRGRCVNGQCVCNIGFTGEDCGTKTCPNNCLDRGF
CEDGKCVCFEGYTGEDCSVLTCPADCNDQGQCLNGMCICDLGFTGDDCSEISPPRDLTVT
EVDPETVDVAWVNEMLVTEYLITYVPTAPGGLEMEMRVSGEKKTATIRELEPGIEYLISV
FAVLNSKMSVPVSARIATHLPEPEGLKFKSVKETSVEVEWDPLNIPFDGWNLIFRNTKEE
DGEILNSLAPPETTFEQSGLGPGQEYEVKLEVVKNNTRGPPASKNVVTMIDAPSQVDVRD
VTDTTALVTWLQPVAQVDGISVSYGPNTDSSDRNTIELSSIETQYHLAELSPDTEYEVSL
MARRGEMSSFPIYETFTTDLDSPKHLKAIEQTDESITLEWRNSRANVLNYRVKYGPLSGG
EHGELVFPSGLQDTTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAVTDLDPPKDLQV
SETTETTLALVWRRPVAKIDTYSLVFIPADGDKTELKIPGAANTYILTGLNPGMLHTITL
TAERGRKMSAPATLSASTDEEKPQVGNITISDVSWDSFSMSWDLDRGEVEGFLIEVSDPD
GLSDGQNHTLSGQEFSLAVTDLSPSTFYRVTLYGLYKGELLDPVFAEAITGLGTPKGIRF
SDVTDTSATVHWTMPHTRVDNYRVIYVPIQGGSPLTLRVDGGESQAMLSNLTPGVTYQVT
VIAVKGLEESEPGSERVTTALDKPRGLTAVNISDTEALLLWQPSIATVDGYVITYSADSV
APVMERVSGNTVEFEMSSLTPATLYTVKVYAFRDTAKSAATSTDFTTDVDAPQNLAASNI
QTETAMLTWKPPRADISGYILSFESADGVVKEVVLSPTATFYSMSQLTASTEYTVKLQAI
AGPKRSRVISTVFLTIGVLYKHPKDCSQALLNGDTTSGLYTIYLRGDESQPLQVYCDMTT
DGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSFGQYELRVDLRD
KGESAYAQYDKFSISEPRARYKVHVGGYSGTAGDSMTYHHGRPFSTYDNDNDIAVTNCAL
SYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWFHWKGHEHSVEFAEMKIRPANFRNFEGRK
KRS
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0007165 | signal transduction | biological_proccess | IEA |
GO:0007413 | axonal fasciculation | biological_proccess | IMP |
GO:0030517 | negative regulation of axon extension | biological_proccess | IMP |
GO:0001755 | neural crest cell migration | biological_proccess | IEP |
GO:0007498 | mesoderm development | biological_proccess | IEP |
GO:0005509 | calcium ion binding | mollecular_function | IEA |
GO:0005102 | receptor binding | mollecular_function | IEA |
GO:0005575 | cellular_component | cell_component | ND |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSDARG00000021948
- Expression info from Arrayexpress [?] : ENSDARG00000021948
- Protein expression from Protein Atlas: [?] ENSDARG00000021948
Click on [?] for more information.