WDR3 (Danio rerio)
Description [+]
- Synonyms: WDR3
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Danio rerio
- Short gene description: WD repeat domain 3 [Source:RefSeq_peptide;Acc:NP_942574]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: WDR3-D_rerio
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | WD40 | 98 | 136 |
PFAM A | WD40 | 140 | 178 |
PFAM A | WD40 | 398 | 435 |
PFAM A | WD40 | 479 | 517 |
PFAM A | WD40 | 575 | 613 |
PFAM A | WD40 | 617 | 655 |
PFAM A | WD40 | 659 | 697 |
PFAM A | Utp12 | 715 | 934 |
Protein sequence [+]
wdr3 | Danio rerio | 7955 | length:938
MGLTKQYLRYVASAVFGVIGSQKANIAFVTLRGGEKGRYVAVGACEHVFIWDVRKAEKVL
ILEGKKHEVTYLCPSPDGVHIAVGYEDGGVRIFSLLNGESNVSFSGHKSAVSVIKYDALG
ARLVTGSRDTDVIVWDVINECGLYRLKGHKDAITQVLFLESKNLLITSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMVLLNQENRLLTGSADSELRAWDIQDIEEVKELGEPQEKKVRT
LLEDEEEDEEGPDEEPEERILSCKKAGSILREARDRVVSLVTDAKAKVLACHGLDATLEV
FTVLSEEEIQRKMDRKLKKAKKKAKSQEGGEEASEPVVERKLKDEIMKLANIRASSKIRS
MDCLLVPNGEMKVVLLLQNNTVETYTLKTTEKNPTGNKTSRLTLGGHRSDVRTVAFSSDN
IAILSASGDTVKVWNRSTLQVIRTMGCEYALCSIFVPGDRQIILGTKSGKIQIFDLASGS
LLETTDAHEGALWSMCLSPDQRGIVTGGADKTVKFWDFELIKDEDSMINKRLTVKHTRTL
QLDEDVLCVRFSPDQRLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHDSALI
ATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKFE
HIQTLEGHHREVWCLAISPNGDHIVSSSHDKSLRLWERTREPIILEEEKEMEREAEFEES
LAKGDDPVVPGETKGEAEPAGRKTVETVKAAERIMEAIELYREESKNLEEHKAACEAAGK
KLPPLKMNPILMAFGNISPSRYVLEVMKKVRSSELEVSLLVLPFPYVPDLLKLFNAYVKE
GLEVELVCRCLFFLLRVHFGQITSNQMLLSVIDELRANTISKVREIRDVLGFNSAGLQFL
QREIESREDVTFFADATDRFEEKRRKRRKRERVILTIT
ILEGKKHEVTYLCPSPDGVHIAVGYEDGGVRIFSLLNGESNVSFSGHKSAVSVIKYDALG
ARLVTGSRDTDVIVWDVINECGLYRLKGHKDAITQVLFLESKNLLITSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMVLLNQENRLLTGSADSELRAWDIQDIEEVKELGEPQEKKVRT
LLEDEEEDEEGPDEEPEERILSCKKAGSILREARDRVVSLVTDAKAKVLACHGLDATLEV
FTVLSEEEIQRKMDRKLKKAKKKAKSQEGGEEASEPVVERKLKDEIMKLANIRASSKIRS
MDCLLVPNGEMKVVLLLQNNTVETYTLKTTEKNPTGNKTSRLTLGGHRSDVRTVAFSSDN
IAILSASGDTVKVWNRSTLQVIRTMGCEYALCSIFVPGDRQIILGTKSGKIQIFDLASGS
LLETTDAHEGALWSMCLSPDQRGIVTGGADKTVKFWDFELIKDEDSMINKRLTVKHTRTL
QLDEDVLCVRFSPDQRLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHDSALI
ATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKFE
HIQTLEGHHREVWCLAISPNGDHIVSSSHDKSLRLWERTREPIILEEEKEMEREAEFEES
LAKGDDPVVPGETKGEAEPAGRKTVETVKAAERIMEAIELYREESKNLEEHKAACEAAGK
KLPPLKMNPILMAFGNISPSRYVLEVMKKVRSSELEVSLLVLPFPYVPDLLKLFNAYVKE
GLEVELVCRCLFFLLRVHFGQITSNQMLLSVIDELRANTISKVREIRDVLGFNSAGLQFL
QREIESREDVTFFADATDRFEEKRRKRRKRERVILTIT
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006364 | rRNA processing | biological_proccess | IEA |
GO:0032040 | small-subunit processome | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Gene info from ZFIN [?] ZDB-GENE-030131-9830
- Ensembl genome browser [?] : ENSDARG00000011079
- Expression info from Arrayexpress [?] : ENSDARG00000011079
- Protein expression from Protein Atlas: [?] ENSDARG00000011079
- Community gene edition from Wikigenes: [?] 321058
Click on [?] for more information.