ENSCING00000005068 (Ciona intestinalis)
Description [+]
- Synonyms:
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Urochordata; Ciona intestinalis
- Short gene description:
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: -C_intestinalis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | WD40 | 55 | 93 |
PFAM A | WD40 | 97 | 135 |
PFAM A | WD40 | 139 | 177 |
PFAM A | WD40 | 181 | 219 |
PFAM A | WD40 | 484 | 522 |
PFAM A | WD40 | 581 | 619 |
PFAM A | WD40 | 623 | 661 |
PFAM A | WD40 | 665 | 703 |
PFAM A | Utp12 | 720 | 939 |
Protein sequence [+]
| Ciona intestinalis | 7719 | length:944
MGITKQYLRYLSVAQFGVLGSARCNVEYLSMRNTQGRYVAAAACENVCVWDMRTLQLVLL
LQGDNQEVTCIKSSPNSQHLAVGYVDGTIRIFSLVTAESDVTFSGHRTAISCLAFDKAGM
KLASGSHDTEVVVWDLVNESGLYRLKGHKGIITDCYFVKQRNMLITSSKDTYVKWWDLDT
QHCFKTMVGHRSEVWSFCLTPDERRIITGSGDSELRIWSVEFIANKDSMEAPLVKLQKTK
LDDVTSNDVTSDDVISDDVMQGIEERLVSCIKVGSVMRKGRDRVVTLKVSKDGRLLTCHG
NDKMVEFFRIFDEAEVALRIKKKLKRAKKKQKNEGQEENDITIERSIEDEISHVGSFTCA
GKLSSLDLTAPTPNTYNTVALLRNNQIETVSTISLLSQPEYSSLKRLSQLGHRTDTKSMC
FTMDGMALLTTSSESAKLWNRSSHQCIRTLKCSHPKCCLFVPGDRQVILGTQEGALELHD
VASGTLLETIQAHEGAVSCVALFPNKRGIVSGGPDKKIKFWEFDLISDENYSVSSKRVSL
THTRTFELDDQILDVEFTPNNRFIAASLLDCSVKIFYVDSLKFFLSLYGHSLPPSCVSIS
SDSTLIVSGSPDRNVKIWGLDFGDCHRSLFAHDNDVTGLKFVPDTHLFFSCGKDGLVKQW
DADNFTLIQVLQGHLGPVWSLCVSPDGDHVATCGNDRSLRLWNRSMEVVIPDEEREHERE
KEEEKLLAKNQDTTVSGKSRSCTFYNFLRKKRTTVESVRGAEKIMEAIELFNEEKVKEEE
FKFINKNKDVFYKSDHPILRAYGNITVSVMFFYFRLRDIELEESLLVLPFSYVPDLLQLL
GTFVARGREVELACRCIFFLLRIHHGRITTNQTLVNVLDDLRHNTETKIDQLRNTIGFNL
AALGHIRRQFESKNDVTFFSDATQRANDKKKRRKRTTQRAVLTT
LQGDNQEVTCIKSSPNSQHLAVGYVDGTIRIFSLVTAESDVTFSGHRTAISCLAFDKAGM
KLASGSHDTEVVVWDLVNESGLYRLKGHKGIITDCYFVKQRNMLITSSKDTYVKWWDLDT
QHCFKTMVGHRSEVWSFCLTPDERRIITGSGDSELRIWSVEFIANKDSMEAPLVKLQKTK
LDDVTSNDVTSDDVISDDVMQGIEERLVSCIKVGSVMRKGRDRVVTLKVSKDGRLLTCHG
NDKMVEFFRIFDEAEVALRIKKKLKRAKKKQKNEGQEENDITIERSIEDEISHVGSFTCA
GKLSSLDLTAPTPNTYNTVALLRNNQIETVSTISLLSQPEYSSLKRLSQLGHRTDTKSMC
FTMDGMALLTTSSESAKLWNRSSHQCIRTLKCSHPKCCLFVPGDRQVILGTQEGALELHD
VASGTLLETIQAHEGAVSCVALFPNKRGIVSGGPDKKIKFWEFDLISDENYSVSSKRVSL
THTRTFELDDQILDVEFTPNNRFIAASLLDCSVKIFYVDSLKFFLSLYGHSLPPSCVSIS
SDSTLIVSGSPDRNVKIWGLDFGDCHRSLFAHDNDVTGLKFVPDTHLFFSCGKDGLVKQW
DADNFTLIQVLQGHLGPVWSLCVSPDGDHVATCGNDRSLRLWNRSMEVVIPDEEREHERE
KEEEKLLAKNQDTTVSGKSRSCTFYNFLRKKRTTVESVRGAEKIMEAIELFNEEKVKEEE
FKFINKNKDVFYKSDHPILRAYGNITVSVMFFYFRLRDIELEESLLVLPFSYVPDLLQLL
GTFVARGREVELACRCIFFLLRIHHGRITTNQTLVNVLDDLRHNTETKIDQLRNTIGFNL
AALGHIRRQFESKNDVTFFSDATQRANDKKKRRKRTTQRAVLTT
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Information from other databases [+]
- Ensembl genome browser [?] : ENSCING00000005068
- Expression info from Arrayexpress [?] : ENSCING00000005068
- Protein expression from Protein Atlas: [?] ENSCING00000005068
Click on [?] for more information.