APAF1 (Anolis carolinensis)
Description [+]
- Synonyms: APAF1
- Species: Anolis carolinensis
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-A_carolinensis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 7 | 91 |
PFAM A | NB-ARC | 130 | 415 |
PFAM A | WD40 | 606 | 644 |
PFAM A | WD40 | 648 | 686 |
PFAM A | WD40 | 690 | 731 |
PFAM A | WD40 | 735 | 773 |
PFAM A | WD40 | 874 | 912 |
PFAM A | WD40 | 998 | 1036 |
PFAM A | WD40 | 1080 | 1118 |
PFAM A | WD40 | 1122 | 1160 |
Protein sequence [+]
APAF1 | Anolis carolinensis | 28377 | length:1254
TMDLTARSHLLQNREALERDIKTSYVIDHMIADGALTPQEEAEVKAVTTQRDRAAKLIKT
ILKKDDHAYISFYNALVHEGYKDLAALLQDGIPIISPRNGNKSTDGVTSYVKTILCEGGV
PQRPVVFATRPELTKRIQRKLYKLKSDPGWVVIYGMAGCGKTVLAADALRDHNLLKDCFP
GGVHWVSIGKQDKSGLLIKLQNLCLRLDQDVTYLQRPPLNIEEAKDRLRVLLFRKYPRSL
LVLDDIWDSWVLKAFDSHFQILLTSRDRSVTDSVTGKKYEVPVESGLSHEKALEILSLFV
NMEITELPEKADWIVKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFRRIKKSSSY
DYEALDEAMSISVEMLPENSKDYYRDLSVLQKDVKVPSKVFCVLWDIETEEAEDILQGFV
NKSLLFCDRNGKSFHYYLHDLQLDFLTEKNRDQLQALHKKVVHQYKNHYAQYMPNSTQED
WMYWYNFLAYHMSSASMHDELCALMFSLEWIKTKTELVGPAHLIHEYVEYSEILNEKDPI
ARENFQEFLSLNGHLLGRQPSLDIVQLGLCQPESSKVYQQAKLQAQQGLDKGSFYVEWMN
KQSIKNTYRLVVRPHTDAVYHACFSQDRHRIASCGADKTLQIFKAESGEKLLEVKAHDDE
VLCCSFSADDRFVATCSADKKVKVWNSRTGQPVCIFEEHTEQVNCCQFSNTNHNQFLLAT
CSNDSFIKLWDLNKKYCRNTLFDHSSSVTHCRFSPNDKYIASCSADGTLMLWYAQSANKR
KTVDIRGNFRNVDEYQDDMEVLVKCCSWSSDSTTIVVAAKNKLFRTDTKISTSLPEVLIN
HHYTIQYCDFCPNSQMVAVALSNYSVEIWNIESCSKIADCRGHMSWVHSVTFSFDGSLFL
TSSDDQTIRIWETSKVCNFSAIVLNREIDVLFLDSDVIILAIDSSKRLQLISGYTGNTIY
LTKEQDSLICCCCLSHDRKVAAFGENNGTVKVLSLQNGNTLNSRTGHREAVQHCQFTSDG
KTLISSSDDSTIQVWNWQSEECILLKGHNERVKKFLLLKDSRLLSWSFDGTVKLWNIVTG
EIEKDVICHENAILSCAISPDATMFSTTSSDKTAKIWSFETSSMLHKLNSHESCVRCCAF
SLNNELLATGDDNREIRVWDVSRGELLHLCSRASIDEGESAHEGWVTDLCFSPDNKILVS
SAGYIKWWNVDTGQPLQTFYTNGTDLKSLHVSPDFKVCVTVDNLGILYVLRIME
ILKKDDHAYISFYNALVHEGYKDLAALLQDGIPIISPRNGNKSTDGVTSYVKTILCEGGV
PQRPVVFATRPELTKRIQRKLYKLKSDPGWVVIYGMAGCGKTVLAADALRDHNLLKDCFP
GGVHWVSIGKQDKSGLLIKLQNLCLRLDQDVTYLQRPPLNIEEAKDRLRVLLFRKYPRSL
LVLDDIWDSWVLKAFDSHFQILLTSRDRSVTDSVTGKKYEVPVESGLSHEKALEILSLFV
NMEITELPEKADWIVKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFRRIKKSSSY
DYEALDEAMSISVEMLPENSKDYYRDLSVLQKDVKVPSKVFCVLWDIETEEAEDILQGFV
NKSLLFCDRNGKSFHYYLHDLQLDFLTEKNRDQLQALHKKVVHQYKNHYAQYMPNSTQED
WMYWYNFLAYHMSSASMHDELCALMFSLEWIKTKTELVGPAHLIHEYVEYSEILNEKDPI
ARENFQEFLSLNGHLLGRQPSLDIVQLGLCQPESSKVYQQAKLQAQQGLDKGSFYVEWMN
KQSIKNTYRLVVRPHTDAVYHACFSQDRHRIASCGADKTLQIFKAESGEKLLEVKAHDDE
VLCCSFSADDRFVATCSADKKVKVWNSRTGQPVCIFEEHTEQVNCCQFSNTNHNQFLLAT
CSNDSFIKLWDLNKKYCRNTLFDHSSSVTHCRFSPNDKYIASCSADGTLMLWYAQSANKR
KTVDIRGNFRNVDEYQDDMEVLVKCCSWSSDSTTIVVAAKNKLFRTDTKISTSLPEVLIN
HHYTIQYCDFCPNSQMVAVALSNYSVEIWNIESCSKIADCRGHMSWVHSVTFSFDGSLFL
TSSDDQTIRIWETSKVCNFSAIVLNREIDVLFLDSDVIILAIDSSKRLQLISGYTGNTIY
LTKEQDSLICCCCLSHDRKVAAFGENNGTVKVLSLQNGNTLNSRTGHREAVQHCQFTSDG
KTLISSSDDSTIQVWNWQSEECILLKGHNERVKKFLLLKDSRLLSWSFDGTVKLWNIVTG
EIEKDVICHENAILSCAISPDATMFSTTSSDKTAKIWSFETSSMLHKLNSHESCVRCCAF
SLNNELLATGDDNREIRVWDVSRGELLHLCSRASIDEGESAHEGWVTDLCFSPDNKILVS
SAGYIKWWNVDTGQPLQTFYTNGTDLKSLHVSPDFKVCVTVDNLGILYVLRIME
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0006915 | apoptosis | biological_proccess | IEA |
GO:0008635 | activation of caspase activity by cytochrome c | biological_proccess | IEA |
GO:0007275 | multicellular organismal development | biological_proccess | IEA |
GO:0007420 | brain development | biological_proccess | IEA |
GO:0006309 | DNA fragmentation during apoptosis | biological_proccess | IEA |
GO:0006919 | activation of caspase activity | biological_proccess | IEA |
GO:0001843 | neural tube closure | biological_proccess | IEA |
GO:0030900 | forebrain development | biological_proccess | IEA |
GO:0051402 | neuron apoptosis | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0042802 | identical protein binding | mollecular_function | IEA |
GO:0016505 | apoptotic protease activator activity | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005625 | soluble fraction | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSACAG00000013012
- Expression info from Arrayexpress [?] : ENSACAG00000013012
- Protein expression from Protein Atlas: [?] ENSACAG00000013012
Click on [?] for more information.